STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PCG2Mitochondrial glycoprotein family protein-like. (240 aa)    
Predicted Functional Partners:
A0A0K9P1W0
Mitochondrial 28S ribosomal protein S29-like protein.
   
   0.756
ZOSMA_97G00270
Ribosomal small subunit Rsm22.
    
   0.714
ZOSMA_21G00490
Ribosomal RNA small subunit methyltransferase H.
    
   0.503
A0A0K9PTW3
Putative Low molecular weight protein-tyrosine-phosphatase.
    
   0.503
ZOSMA_11G00650
Hydrolase Cof, related.
    
   0.503
ZOSMA_30G00650
Solute carrier family 35 member F5.
      
 0.420
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.