Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ZOSMA_28G01140Protein kinase superfamily protein. (624 aa)    
Predicted Functional Partners:
ZOSMA_1G03290
Ribosomal protein S15 family protein.
      
 0.668
ZOSMA_16G00350
Carboxypeptidase; Belongs to the peptidase S10 family.
      
 0.591
ZOSMA_64G00560
BHLH domain-containing protein.
    
 
 0.579
ZOSMA_18G00430
BHLH domain-containing protein.
    
 
 0.579
A0A0K9Q2R8
BHLH domain-containing protein.
    
 
 0.579
A0A0K9Q101
Uncharacterized protein.
      
 0.569
A0A0K9PBT6
C2H2-type domain-containing protein.
      
 0.568
ZOSMA_10G01240
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.544
A0A0K9PSL2
Sigma 54 modulation protein/ribosomal protein S30EA.
      
 0.474
A0A0K9PQL4
Ubiquitin-like domain-containing CTD phosphatase.
      
 0.473
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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