STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_2G02920Uncharacterized protein. (298 aa)    
Predicted Functional Partners:
A0A0K9PXE4
Polygalacturonase, family GH28; Belongs to the glycosyl hydrolase 28 family.
  
  
 
0.614
ZOSMA_52G00610
Polygalacturonase, family GH28.
  
  
 
0.600
ZOSMA_18G00880
Arabinoxylan arabinofuranohydrolase, family GH51.
     
 0.578
A0A0K9PXD9
Polygalacturonase, family GH28.
  
  
 
0.528
ZOSMA_14G00920
Polygalacturonase, family GH28.
  
  
 
0.518
ZOSMA_40G00230
60S ribosomal protein L21, putative, expressed.
   
   0.514
ZOSMA_19G00220
60S ribosomal protein L21, putative, expressed.
   
   0.514
ZOSMA_24G01450
BRISC and BRCA1-A complex member 1.
    
  0.489
ZOSMA_25G01080
Beta-xylosidase, family GH3.
    
  0.487
A0A0K9PVL2
Beta-xylosidase, family GH3.
    
  0.487
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.