STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_29G00660J domain-containing protein. (2566 aa)    
Predicted Functional Partners:
ZOSMA_85G00520
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.596
A0A0K9PI36
Uncharacterized protein.
   
 
 0.596
A0A0K9PTP0
Uncharacterized protein.
  
  
 0.589
ZOSMA_92G00050
Putative Sorting nexin-4.
  
 
 
 0.540
A0A0K9PZT3
Putative Sorting nexin-4.
  
 
 
 0.535
A0A0K9PH98
Putative Heat shock 70 kDa protein.
    
 
 0.512
ZOSMA_72G00610
Protein transport protein Sec24-like protein.
   
  
 0.502
ZOSMA_1G00240
Sorting nexin 2B.
  
 
 
 0.498
ZOSMA_14G01720
LsmAD domain-containing protein.
   
  
 0.482
A0A0K9PU95
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
      
 0.481
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.