STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_26G01520Clade-E Terpene synthase, putative Ent-kaur-16-ene synthase, chloroplastic; Belongs to the terpene synthase family. (597 aa)    
Predicted Functional Partners:
A0A0K9PLF7
Uncharacterized protein; Belongs to the cytochrome P450 family.
     
 0.914
ZOSMA_52G00660
Clade-C Terpene synthase, putative ent-copalyl diphosphate synthase 1, chloroplastic; Belongs to the terpene synthase family.
 
   
0.890
ZOSMA_6G01950
Hopanoid-associated sugar epimerase.
     
 0.862
ZOSMA_59G00530
Nogo-B receptor.
     
 0.851
ZOSMA_29G00710
Alkyl transferase; Belongs to the UPP synthase family.
     
 0.844
ZOSMA_8G01150
Squalene synthase.
     
 0.843
ZOSMA_70G00610
Farnesyl pyrophosphate synthase 2; Belongs to the FPP/GGPP synthase family.
     
 0.826
A0A0K9Q373
Farnesyl pyrophosphate synthase 1; Belongs to the FPP/GGPP synthase family.
     
 0.826
ZOSMA_26G00610
Putative phytol kinase 2, chloroplastic.
     
 0.825
A0A0K9PEZ4
Alkyl transferase; Belongs to the UPP synthase family.
     
 0.814
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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