STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_25G00450Thylakoid lumenal 15.0 kDa protein 2, chloroplastic. (226 aa)    
Predicted Functional Partners:
A0A0K9PU10
Ycf48-like protein.
  
    0.520
ZOSMA_7G01100
Uncharacterized protein.
  
     0.498
A0A0K9PQ42
Uncharacterized protein.
  
    0.496
ZOSMA_73G00050
Peptidylprolyl isomerase.
   
  
 0.492
A0A0K9NXA5
Peptidylprolyl isomerase.
   
  
 0.492
ZOSMA_99G00210
Uncharacterized protein.
  
    0.491
A0A0K9PQ59
PsaB RNA binding protein.
  
    0.486
ZOSMA_1G02580
Magnesium protoporphyrin IX methyltransferase.
  
    0.485
ZOSMA_93G00960
Tic20 family protein Ycf60.
  
    0.472
ZOSMA_36G00470
Tetrapyrrole-binding protein, chloroplastic.
  
    0.465
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.