STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_25G00930Vesicle-fusing ATPase. (739 aa)    
Predicted Functional Partners:
ZOSMA_17G00620
SEC1 family transport protein SLY1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.998
A0A0K9PYB5
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.990
A0A0K9Q4D9
Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
    
 0.989
ZOSMA_76G00880
Alpha-soluble NSF attachment protein.
   
 0.988
ZOSMA_3G00640
Alpha-soluble NSF attachment protein.
   
 0.988
ZOSMA_30G01060
Gamma-soluble NSF attachment protein.
   
 0.987
ZOSMA_50G00560
Cation exchanger-like protein.
    
 0.980
ZOSMA_83G00470
Syntaxin 43; Belongs to the syntaxin family.
    
 0.970
A0A0K9PK18
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family.
   
 0.950
ZOSMA_30G00770
Syntaxin-51.
    
 0.947
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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