STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_25G01150Uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. (289 aa)    
Predicted Functional Partners:
ZOSMA_84G00180
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
     
 0.911
A0A0K9PS42
Hydroxymethylbilane synthase.
   
 
 0.911
ZOSMA_12G00880
Hydroxymethylbilane synthase.
   
 
 0.911
ZOSMA_2G00400
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
   
 
 0.909
A0A0K9PFV7
Putative Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A,putative.
   
  0.854
ZOSMA_23G00850
Septum-promoting GTP-binding protein 1.
    
 0.783
ZOSMA_12G00870
Hydroxymethylbilane synthase.
     
 0.648
ZOSMA_10G00480
Protein kinase superfamily protein.
    
 0.610
A0A0K9PCA9
E3 ubiquitin-protein ligase PRT1.
    
  0.580
ZOSMA_55G00490
Protein kinase domain-containing protein.
   
  0.523
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.