STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_25G01400Putative Histone H1.1. (300 aa)    
Predicted Functional Partners:
A0A0K9PK03
30S ribosomal protein S9.
  
 0.991
ZOSMA_2G00760
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.990
ZOSMA_52G00890
40S ribosomal protein S29.
  
 0.986
ZOSMA_80G00170
30S ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.
  
 0.982
ZOSMA_6G00460
40S ribosomal protein S19-3.
   
 0.982
A0A0K9PEU6
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.982
ZOSMA_24G00320
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.982
ZOSMA_1G01200
40S ribosomal protein S19-3.
   
 0.982
A0A0K9PYF8
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 0.982
ZOSMA_27G01170
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.981
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.