STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_25G01520Actin-related protein; Belongs to the actin family. (431 aa)    
Predicted Functional Partners:
ZOSMA_77G00820
SWI/SNF-related matrix-associated actin-dependent regulator ofchromatin subfamily D member 1.
   
 0.997
ZOSMA_55G00100
RuvB-like helicase; Belongs to the RuvB family.
   
 0.994
A0A0K9PSB5
RuvB-like helicase; Belongs to the RuvB family.
   
 0.990
A0A0K9PTT1
Putative DNA methyltransferase 1-associated protein.
   
 0.990
ZOSMA_63G00370
Leaf and flower related protein.
    
 0.989
ZOSMA_46G00090
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.988
ZOSMA_8G01930
SWI/SNF-related, matrix-associated, actin-dependent regulatorof chromatin subfamily B member 1.
   
 0.980
ZOSMA_55G00470
J domain-containing protein.
   
 0.980
ZOSMA_33G01020
Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1.
    
 0.978
A0A0K9Q5Z3
INO80 complex subunit C.
    
 0.961
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.