STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_27G01180Putative Nucleolar complex-associated protein. (486 aa)    
Predicted Functional Partners:
A0A0K9PHV2
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 
 0.999
ZOSMA_60G00020
Protein MAK16 homolog; Belongs to the MAK16 family.
   
 
 0.998
ZOSMA_41G00040
RRM domain-containing protein.
   
 
 0.998
A0A0K9PNN7
Brix domain-containing protein.
   
 
 0.998
ZOSMA_33G00680
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
 
 0.997
A0A0K9PUK5
Putative rRNA-processing protein EBP2.
   
 
 0.997
ZOSMA_14G00890
Brix domain-containing protein 1.
   
 
 0.997
ZOSMA_38G01160
Nucleolar complex protein-like protein.
   
 
 0.996
ZOSMA_1G01210
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 
 0.996
A0A0K9PIT6
Uncharacterized protein.
   
 
 0.995
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.