STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PG10Uncharacterized protein. (272 aa)    
Predicted Functional Partners:
ZOSMA_15G00340
Usp domain-containing protein.
  
    0.779
ZOSMA_3G00580
N-glycosylase/DNA lyase.
  
 
 0.767
ZOSMA_47G00500
RNA polymerase sigma factor sigA.
  
 
 0.766
ZOSMA_49G00310
Ubiquitin-protein ligase 4.
    
 
 0.747
A0A0K9PX68
Ubiquitin-protein ligase 4.
    
 
 0.747
ZOSMA_53G01060
Putative DNA-3-methyladenine glycosylase.
  
 
 0.744
A0A0K9PEJ3
Uncharacterized protein.
  
 
 0.744
A0A0K9PJJ9
Uncharacterized protein.
  
 
 0.744
ZOSMA_83G00490
DNA_mis_repair domain-containing protein.
   
 
 0.572
ZOSMA_14G01750
DNA-3-methyladenine glycosylase.
     
 0.557
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.