STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_24G00060Uncharacterized protein. (326 aa)    
Predicted Functional Partners:
A0A0K9PY08
Putative Bystin.
   
 
 0.970
ZOSMA_82G00430
Pre-rRNA-processing protein TSR1-like protein.
   
 
 0.956
A0A0K9PVS9
Pre-rRNA-processing protein TSR1-like protein.
   
 
 0.956
ZOSMA_15G00320
Periodic tryptophan protein 2.
   
 
 0.953
ZOSMA_30G00910
Putative U3 small nucleolar ribonucleoprotein imp4.
   
   0.952
ZOSMA_74G01030
Putative WD-repeat protein.
   
   0.946
A0A0K9Q208
Putative WD-repeat protein.
   
   0.946
ZOSMA_79G00440
Putative Something about silencing protein sas10.
   
   0.936
ZOSMA_86G00100
Putative U3 small nucleolar ribonucleoprotein IMP3.
   
 
 0.935
A0A0K9PRI4
Nucleolar complex protein 4.
   
   0.920
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.