STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PGR8Calpain-2 catalytic subunit. (260 aa)    
Predicted Functional Partners:
ZOSMA_96G00380
Calpain-type cysteine protease ADL1; Belongs to the peptidase C2 family.
   
 0.890
A0A0K9PU42
TPX2 domain-containing protein.
   
 0.890
ZOSMA_16G01050
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
   
 0.890
ZOSMA_9G00240
Protein transport protein SEC31.
    
 
 0.823
ZOSMA_87G00080
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
    0.521
ZOSMA_34G00670
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
    0.521
A0A0K9PUH5
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
    0.521
ZOSMA_26G00110
GTP binding protein.
     
 0.463
ZOSMA_94G00270
Uncharacterized protein.
   
 
 0.436
A0A0K9PK70
Uncharacterized protein.
   
 
 0.436
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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