STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PGS6Alpha/beta hydrolase fold. (386 aa)    
Predicted Functional Partners:
ZOSMA_1G02580
Magnesium protoporphyrin IX methyltransferase.
  
 
 0.754
A0A0K9P334
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.730
ZOSMA_3G01120
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
   
 0.730
ZOSMA_3G01100
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.730
A0A0K9P5J6
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.730
ZOSMA_23G00180
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
   
 0.730
ZOSMA_23G00140
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.730
ZOSMA_81G00870
5' nucleotidase, deoxy (Pyrimidine), cytosolic type C proteindomain containing protein-like protein.
  
 0.717
ZOSMA_89G01280
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.717
ZOSMA_76G01030
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.717
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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