STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PH29Putative Pumilio. (1008 aa)    
Predicted Functional Partners:
ZOSMA_48G00820
Acyl-CoA Binding Protein.
   
   0.716
A0A0K9PFA5
Acyl-CoA Binding Protein.
   
   0.716
ZOSMA_16G00670
LSM12-like protein.
    
   0.714
A0A0K9PE16
Cytochrome c oxidase copper chaperone 2.
    
 
 0.691
ZOSMA_15G00780
Uncharacterized protein.
    
 
 0.691
ZOSMA_44G01620
RING-H2 finger protein ATL3I.
    
   0.681
ZOSMA_93G00410
RNase III domain-containing protein.
    
 
 0.577
ZOSMA_69G00100
CCR4-NOT transcription complex subunit 7.
    
 
 0.577
A0A0K9P806
CCR4-NOT transcription complex subunit 7.
    
 
 0.577
A0A0K9PNA7
CCR4-NOT transcription complex subunit 7.
    
 
 0.577
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.