STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PH48N(6)-adenine-specific DNA methyltransferase 2. (132 aa)    
Predicted Functional Partners:
A0A0K9PSA3
Tubulin-tyrosine ligase family protein, expressed.
    
   0.792
ZOSMA_99G00230
Uncharacterized protein.
    
 0.788
A0A0K9P8L3
Uncharacterized protein.
    
 0.788
ZOSMA_28G00210
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
 0.788
A0A0K9Q3S8
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
 0.788
A0A0K9Q489
Tr-type G domain-containing protein.
    
 0.788
ZOSMA_35G00420
Protein-lysine N-methyltransferase ZOSMA_35G00420; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.
   
  
 0.512
A0A0K9Q245
Rhomboid family protein.
 
      0.488
A0A0K9PWP9
Ribosomal RNA small subunit methyltransferase C.
      
 0.471
ZOSMA_1G03170
Uncharacterized protein.
      
 0.470
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.