STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_23G00580Uncharacterized protein. (61 aa)    
Predicted Functional Partners:
A0A0K9Q274
60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.984
ZOSMA_82G00750
60S ribosomal protein L39.
   
 0.982
ZOSMA_3G00910
60S ribosomal protein L6.
   
 0.982
ZOSMA_81G00050
60S ribosomal protein L10.
   
 0.981
ZOSMA_15G00600
60S acidic ribosomal protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.980
A0A0K9Q2S3
60S acidic ribosomal protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.980
ZOSMA_34G00760
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 0.976
ZOSMA_14G00140
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 0.976
ZOSMA_69G00710
60S ribosomal protein L7a.
   
 0.974
ZOSMA_45G00050
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
 0.974
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.