Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A0K9P374 | A0A0K9PI80 | A0A0K9P374 | A0A0K9PI80 | Elongation factor like protein. | Chaperone protein dnaJ. | 0.983 |
A0A0K9P374 | A0A0K9PQQ4 | A0A0K9P374 | A0A0K9PQQ4 | Elongation factor like protein. | Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. | 0.999 |
A0A0K9P374 | A0A0K9PU09 | A0A0K9P374 | A0A0K9PU09 | Elongation factor like protein. | Chaperone protein dnaJ. | 0.983 |
A0A0K9P374 | A0A0K9Q179 | A0A0K9P374 | A0A0K9Q179 | Elongation factor like protein. | Putative Pre-mRNA splicing factor. | 0.999 |
A0A0K9P374 | A0A0K9Q218 | A0A0K9P374 | A0A0K9Q218 | Elongation factor like protein. | Small nuclear ribonucleoprotein-associated protein. | 0.998 |
A0A0K9P374 | A0A0K9Q6C8 | A0A0K9P374 | A0A0K9Q6C8 | Elongation factor like protein. | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | 0.989 |
A0A0K9P374 | ZOSMA_50G01040 | A0A0K9P374 | A0A0K9NY25 | Elongation factor like protein. | Putative Pre-mRNA-processing-splicing factor. | 0.999 |
A0A0K9P374 | ZOSMA_54G00970 | A0A0K9P374 | A0A0K9NYZ7 | Elongation factor like protein. | DEAD-box ATP-dependent RNA helicase 22. | 0.989 |
A0A0K9P541 | A0A0K9PI80 | A0A0K9P541 | A0A0K9PI80 | Putative Translocation protein sec62. | Chaperone protein dnaJ. | 0.993 |
A0A0K9P541 | A0A0K9PU09 | A0A0K9P541 | A0A0K9PU09 | Putative Translocation protein sec62. | Chaperone protein dnaJ. | 0.993 |
A0A0K9PI80 | A0A0K9P374 | A0A0K9PI80 | A0A0K9P374 | Chaperone protein dnaJ. | Elongation factor like protein. | 0.983 |
A0A0K9PI80 | A0A0K9P541 | A0A0K9PI80 | A0A0K9P541 | Chaperone protein dnaJ. | Putative Translocation protein sec62. | 0.993 |
A0A0K9PI80 | A0A0K9PQQ4 | A0A0K9PI80 | A0A0K9PQQ4 | Chaperone protein dnaJ. | Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. | 0.966 |
A0A0K9PI80 | A0A0K9PU09 | A0A0K9PI80 | A0A0K9PU09 | Chaperone protein dnaJ. | Chaperone protein dnaJ. | 0.980 |
A0A0K9PI80 | A0A0K9Q179 | A0A0K9PI80 | A0A0K9Q179 | Chaperone protein dnaJ. | Putative Pre-mRNA splicing factor. | 0.979 |
A0A0K9PI80 | A0A0K9Q218 | A0A0K9PI80 | A0A0K9Q218 | Chaperone protein dnaJ. | Small nuclear ribonucleoprotein-associated protein. | 0.963 |
A0A0K9PI80 | A0A0K9Q4A7 | A0A0K9PI80 | A0A0K9Q4A7 | Chaperone protein dnaJ. | Putative Translocation protein sec62. | 0.993 |
A0A0K9PI80 | A0A0K9Q6C8 | A0A0K9PI80 | A0A0K9Q6C8 | Chaperone protein dnaJ. | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | 0.961 |
A0A0K9PI80 | ZOSMA_50G01040 | A0A0K9PI80 | A0A0K9NY25 | Chaperone protein dnaJ. | Putative Pre-mRNA-processing-splicing factor. | 0.994 |
A0A0K9PI80 | ZOSMA_54G00970 | A0A0K9PI80 | A0A0K9NYZ7 | Chaperone protein dnaJ. | DEAD-box ATP-dependent RNA helicase 22. | 0.961 |
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