STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_22G00800Vacuolar protein sorting 45; Belongs to the STXBP/unc-18/SEC1 family. (565 aa)    
Predicted Functional Partners:
ZOSMA_83G00470
Syntaxin 43; Belongs to the syntaxin family.
    
 
 0.987
ZOSMA_31G00270
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.928
A0A0K9P305
Vesicle transport v-SNARE 13.
   
 
 0.927
A0A0K9PSJ8
Vesicle transport v-SNARE 13.
   
 
 0.927
A0A0K9PEF7
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
 0.916
A0A0K9PQ81
Conserved oligomeric Golgi complex subunit 4.
   
 
 0.911
ZOSMA_6G00020
Putative Endoplasmic reticulum-Golgi intermediate compartment protein,putative.
 
      0.898
A0A0K9PZE1
tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG.
 
      0.898
ZOSMA_27G01230
Syntaxin-61.
    
 
 0.894
ZOSMA_2G02690
Putative Endoplasmic reticulum-Golgi intermediate compartment protein,putative.
 
      0.893
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.