STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_21G00530Sorbitol dehydrogenase. (354 aa)    
Predicted Functional Partners:
ZOSMA_92G00760
Xylulose kinase.
  
 
 0.908
A0A0K9PM53
Xylose isomerase.
     
 0.902
A0A0K9Q633
Fructokinase-2; Belongs to the carbohydrate kinase PfkB family.
  
 
 0.894
ZOSMA_68G00790
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.891
ZOSMA_71G00290
8-amino-7-oxononanoate synthase.
 
 
 0.884
A0A0K9PAV6
Phosphotransferase.
   
 
 0.881
A0A0K9PBR7
Phosphotransferase.
   
 
 0.881
ZOSMA_23G01440
Phosphotransferase.
   
 
 0.881
ZOSMA_4G02180
Probable 6-phosphogluconolactonase; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily.
  
 
 0.880
A0A0K9PWP6
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily.
  
 
 0.875
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.