STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PK17Uncharacterized protein. (773 aa)    
Predicted Functional Partners:
A0A0K9Q2G8
Tower domain-containing protein.
   
 0.970
ZOSMA_24G01450
BRISC and BRCA1-A complex member 1.
    
 0.954
A0A0K9PWR7
Uncharacterized protein.
  
 
 
0.937
ZOSMA_42G00570
DNA repair protein RAD50.
    
 0.909
ZOSMA_31G01060
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 0.901
A0A0K9PU84
FHA domain-containing protein.
    
 0.900
A0A0K9PWB5
Uncharacterized protein.
    
 0.900
ZOSMA_50G00690
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 0.897
A0A0K9PDW1
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
   
 0.897
A0A0K9Q3P8
Uncharacterized protein.
   
 0.856
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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