STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_22G00890Putative Ribosome maturation protein SBDS. (353 aa)    
Predicted Functional Partners:
ZOSMA_33G00840
60S ribosomal protein L37a-2.
  
   0.997
A0A0K9P8A9
60S ribosomal protein L37a-2.
  
   0.997
EIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.
  
 
 0.994
ZOSMA_82G00340
60S ribosomal protein L24.
  
 
 0.992
ZOSMA_27G00020
60S ribosomal protein L7-like protein.
   
 
 0.992
ZOSMA_19G00540
60S ribosomal protein L7-4.
   
 
 0.992
ZOSMA_13G00300
60S ribosomal protein L24.
  
 
 0.992
A0A0K9PYB4
60S ribosomal protein L7-4.
   
 
 0.992
ZOSMA_84G00390
60S ribosomal protein L11a; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.991
ZOSMA_4G01220
60S ribosomal protein L5-1.
   
 
 0.991
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
Server load: low (16%) [HD]