STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_21G00140Shikimate dehydrogenase, 3-dehydroquinate dehydratase. (514 aa)    
Predicted Functional Partners:
A0A0K9PEY4
3-dehydroquinate synthase.
 
 
 
 0.991
ZOSMA_75G00650
3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family.
 
  
 0.954
ZOSMA_69G00040
Chorismate synthase.
  
 
 0.931
ZOSMA_91G00690
Shikimate kinase.
  
 
 0.919
A0A0K9PAY1
Chorismate mutase.
  
 
 0.874
ZOSMA_16G01550
Chorismate mutase.
  
 
 0.874
A0A0K9PJE2
Homogentisate 1,2-dioxygenase.
     
 0.860
A0A0K9P645
Phospho-2-dehydro-3-deoxyheptonate aldolase.
  
 0.841
ZOSMA_5G02610
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
 
 0.839
ZOSMA_13G01160
Nicotinamide-nucleotide adenylyltransferase.
  
  
 0.826
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.