STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PLT41,3-beta-glucan synthase. (1782 aa)    
Predicted Functional Partners:
ZOSMA_4G01670
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
   
 
 0.493
A0A0K9Q4Y4
UTP--glucose-1-phosphate uridylyltransferase.
     
 0.493
ZOSMA_44G00220
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
   
 
 0.480
ZOSMA_65G00390
Gigantea.
      
 0.459
A0A0K9PY73
RIC1-like protein.
      
 0.457
A0A0K9Q2K2
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
      
 0.455
A0A0K9PCR3
Ribose-5-phosphate isomerase.
      
 0.454
ZOSMA_1G00630
Ethanolamine kinase.
      
 0.449
ZOSMA_42G00300
Ribose-5-phosphate isomerase.
      
 0.444
A0A0K9NVP3
1,3-beta-glucan synthase.
  
  
 
0.435
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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