STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_21G00440Putative Pentatricopeptide repeat-containing protein. (487 aa)    
Predicted Functional Partners:
ZOSMA_16G00170
Putative Pentatricopeptide repeat-containing protein.
  
   0.902
A0A0K9P7Q2
Uncharacterized protein.
    
   0.825
ZOSMA_24G01150
Putative 50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
   0.807
A0A0K9NYC8
50S ribosomal protein L21.
   
   0.805
A0A0K9P1W0
Mitochondrial 28S ribosomal protein S29-like protein.
   
   0.805
ZOSMA_42G00260
Uncharacterized protein.
   
   0.805
ZOSMA_53G00490
30S ribosomal protein S18 family; Belongs to the bacterial ribosomal protein bS18 family.
   
   0.803
ZOSMA_38G00730
50S ribosomal protein L15, putative, expressed.
   
   0.802
A0A0K9PHF7
Uncharacterized protein.
   
   0.802
A0A0K9PXY8
Uncharacterized protein.
   
   0.802
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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