STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_1G00240Sorting nexin 2B. (341 aa)    
Predicted Functional Partners:
A0A0K9PU95
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 
 0.844
ZOSMA_85G00520
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.770
A0A0K9PI36
Uncharacterized protein.
   
 
 0.770
ZOSMA_38G00440
Vacuolar protein sorting-associated protein 26-like protein.
    
 
 0.764
A0A0K9Q5I3
Vacuolar protein sorting-associated protein 26B.
    
 
 0.764
A0A0K9PU10
Ycf48-like protein.
    
 0.651
ZOSMA_88G00230
AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.
    
 0.609
ZOSMA_64G00500
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.570
ZOSMA_27G01130
Putative Clathrin heavy chain.
    
 0.570
A0A0K9Q2I2
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.570
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.