STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_21G00710Xyloglucan alpha-1,2-fucosyltransferase, family GT37. (585 aa)    
Predicted Functional Partners:
ZOSMA_83G00260
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
   
   0.695
ZOSMA_25G00880
Glutamyl-tRNA(Gln) amidotransferase subunit A.
  
 
 0.647
A0A0K9PYT9
Glutamyl-tRNA(Gln) amidotransferase subunit A.
  
 
 0.647
GATB
Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
    
  0.645
ZOSMA_8G01340
Amidase 1.
  
 
  0.625
ZOSMA_65G00140
Fatty acid amide hydrolase.
  
 
  0.625
ZOSMA_68G00290
Amidase domain-containing protein.
  
 
  0.625
ZOSMA_49G00050
Amidase domain-containing protein.
  
 
  0.625
A0A0K9PI58
Uncharacterized protein.
  
 
  0.625
ZOSMA_24G00150
Fatty acid amide hydrolase.
  
 
  0.625
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.