STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_21G01090Histone-binding protein RBBP4. (394 aa)    
Predicted Functional Partners:
A0A0K9PM79
Lin-9-like protein.
    
 0.954
A0A0K9PQT8
Mortality factor 4 like 1.
   
 0.946
A0A0K9PR23
Fertilization-independent endosperm protein.
   
 0.946
ZOSMA_30G00410
Polycomb group protein EMBRYONIC FLOWER 2.
    
 0.945
ZOSMA_99G00570
Uncharacterized protein.
   
 0.935
ZOSMA_99G00580
Uncharacterized protein.
   
 0.935
ZOSMA_13G00120
Putative Histone acetyltransferase type B catalytic subunit.
   
 0.932
ZOSMA_11G00610
Putative histone acetyltransferase type B catalytic subunit.
   
 0.932
A0A0K9PNT9
Histone-lysine N-methyltransferase.
    
 0.918
A0A0K9PYR3
Histone-lysine N-methyltransferase.
    
 0.918
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.