STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_21G01140Rac-like GTP-binding protein ARAC3. (198 aa)    
Predicted Functional Partners:
A0A0K9P2E1
zf-LSD1 domain-containing protein.
   
 0.959
ZOSMA_62G00050
E3 ubiquitin-protein ligase KEG.
   
 0.954
ZOSMA_37G00480
Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase.
   
 0.951
ZOSMA_58G00980
Rho GDP-dissociation inhibitor 1.
   
 0.932
ZOSMA_3G00060
Rho GDP-dissociation inhibitor family protein.
   
 0.932
ZOSMA_31G00920
Dedicator of cytokinesis; Belongs to the DOCK family.
   
 0.928
ZOSMA_10G01240
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.903
A0A0K9PNL3
Uncharacterized protein.
   
 0.883
A0A0K9PVG3
Actin associated protein.
   
 0.883
A0A0K9Q022
Protein kinase superfamily protein.
    
 0.864
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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