STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_1G02070SPX domain-containing membrane protein. (702 aa)    
Predicted Functional Partners:
ZOSMA_49G00360
Putative 26S proteasome regulatory subunit S3.
     
 0.870
A0A0K9PVP1
Glutamate carboxypeptidase 2.
   
 
 0.863
A0A0K9NJ56
Uncharacterized protein.
   
 
 0.593
A0A0K9NPW2
Zn-dependent exopeptidase-like protein.
   
 
 0.593
A0A0K9P4L2
Uncharacterized protein.
   
 
 0.593
A0A0K9PHK1
Peptidase_M28 domain-containing protein.
   
 
 0.593
A0A0K9PSW6
Endoplasmic reticulum metallopeptidase.
   
 
 0.593
A0A0K9Q1R4
Uncharacterized protein.
   
 
 0.593
ZOSMA_75G00350
Histone-lysine N-methyltransferase ATXR2.
     
 0.587
ZOSMA_55G00610
TPR_REGION domain-containing protein.
     
 0.587
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.