STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_1G01920Protein kinase domain-containing protein. (1299 aa)    
Predicted Functional Partners:
A0A0K9PCA9
E3 ubiquitin-protein ligase PRT1.
   
 0.648
ZOSMA_58G00020
Putative Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
  0.619
A0A0K9PNZ3
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
  0.619
ZOSMA_62G00050
E3 ubiquitin-protein ligase KEG.
    
 0.614
A0A0K9Q022
Protein kinase superfamily protein.
   
 0.604
A0A0K9P7A4
Uncharacterized protein.
   
 0.579
A0A0K9PTN8
3-deoxy-D-manno-octulosonic acid transferase, family GT30.
    
  0.574
A0A0K9PAQ8
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
   
 0.572
A0A0K9PVV7
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
   
 0.572
A0A0K9PVD2
WD repeat-containing protein.
    
 0.542
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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