ZOSMA_1G03220 protein (Zostera marina) - STRING interaction network

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Score

ZOSMA_1G03220

Cold shock domain-containing protein 4. (198 aa)

Predicted Functional Partners:

ZOSMA_94G00300

0.791

A0A0K9Q2P7

0.791

ZOSMA_29G00080

0.741

ZOSMA_76G00780

0.738

ZOSMA_91G00910

0.737

A0A0K9Q218

0.719

A0A0K9PPU0

0.709

ZOSMA_15G00590

0.707

A0A0K9Q0G2

0.707

A0A0K9PQQ4

0.705

Your Current Organism:

Zostera marina

NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0K9PPU0	A0A0K9PQQ4	A0A0K9PPU0	A0A0K9PQQ4	Cwf21 domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.986
A0A0K9PPU0	A0A0K9Q0G2	A0A0K9PPU0	A0A0K9Q0G2	Cwf21 domain-containing protein.	Sm domain-containing protein.	0.951
A0A0K9PPU0	A0A0K9Q218	A0A0K9PPU0	A0A0K9Q218	Cwf21 domain-containing protein.	Small nuclear ribonucleoprotein-associated protein.	0.988
A0A0K9PPU0	ZOSMA_15G00590	A0A0K9PPU0	A0A0K9PUQ3	Cwf21 domain-containing protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.951
A0A0K9PPU0	ZOSMA_1G03220	A0A0K9PPU0	A0A0K9PMZ2	Cwf21 domain-containing protein.	Cold shock domain-containing protein 4.	0.709
A0A0K9PPU0	ZOSMA_29G00080	A0A0K9PPU0	A0A0K9PDQ8	Cwf21 domain-containing protein.	Nuclear cap-binding protein subunit 2.	0.743
A0A0K9PPU0	ZOSMA_76G00780	A0A0K9PPU0	A0A0K9NR16	Cwf21 domain-containing protein.	Small nuclear ribonucleoprotein G.	0.988
A0A0K9PQQ4	A0A0K9PPU0	A0A0K9PQQ4	A0A0K9PPU0	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Cwf21 domain-containing protein.	0.986
A0A0K9PQQ4	A0A0K9Q0G2	A0A0K9PQQ4	A0A0K9Q0G2	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Sm domain-containing protein.	0.999
A0A0K9PQQ4	A0A0K9Q218	A0A0K9PQQ4	A0A0K9Q218	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein-associated protein.	0.999
A0A0K9PQQ4	A0A0K9Q2P7	A0A0K9PQQ4	A0A0K9Q2P7	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Putative Symplekin.	0.746
A0A0K9PQQ4	ZOSMA_15G00590	A0A0K9PQQ4	A0A0K9PUQ3	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.999
A0A0K9PQQ4	ZOSMA_1G03220	A0A0K9PQQ4	A0A0K9PMZ2	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Cold shock domain-containing protein 4.	0.705
A0A0K9PQQ4	ZOSMA_29G00080	A0A0K9PQQ4	A0A0K9PDQ8	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Nuclear cap-binding protein subunit 2.	0.994
A0A0K9PQQ4	ZOSMA_76G00780	A0A0K9PQQ4	A0A0K9NR16	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein G.	0.999
A0A0K9PQQ4	ZOSMA_94G00300	A0A0K9PQQ4	A0A0K9NIB1	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Uncharacterized protein.	0.746
A0A0K9Q0G2	A0A0K9PPU0	A0A0K9Q0G2	A0A0K9PPU0	Sm domain-containing protein.	Cwf21 domain-containing protein.	0.951
A0A0K9Q0G2	A0A0K9PQQ4	A0A0K9Q0G2	A0A0K9PQQ4	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.999
A0A0K9Q0G2	A0A0K9Q218	A0A0K9Q0G2	A0A0K9Q218	Sm domain-containing protein.	Small nuclear ribonucleoprotein-associated protein.	0.997
A0A0K9Q0G2	A0A0K9Q2P7	A0A0K9Q0G2	A0A0K9Q2P7	Sm domain-containing protein.	Putative Symplekin.	0.596