STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_1G02270Putative Ankyrin repeat domain protein. (396 aa)    
Predicted Functional Partners:
ZOSMA_3G00410
Signal recognition particle 54 kDa protein, chloroplastic.
   
 0.989
A0A0K9PE25
Membrane protein insertase YidC.
    
 
 0.888
ZOSMA_15G00880
Membrane protein insertase YidC.
    
 
 0.740
ZOSMA_10G01240
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.702
A0A0K9P7A4
Uncharacterized protein.
    
 0.664
ZOSMA_27G00140
Signal recognition particle 14 kDa family protein.
    
 0.657
ZOSMA_84G00350
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.638
ZOSMA_8G00310
Serine/threonine-protein phosphatase.
    
  0.635
ZOSMA_5G02610
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
    
 0.634
ZOSMA_25G00880
Glutamyl-tRNA(Gln) amidotransferase subunit A.
   
 0.617
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.