STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PQ02Uncharacterized protein. (225 aa)    
Predicted Functional Partners:
ZOSMA_84G00560
ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase.
    
 0.925
ZOSMA_58G00340
DNA ligase.
    
 0.861
ZOSMA_27G00460
Glycerophosphodiester phosphodiesterase gde1.
    
 0.820
ZOSMA_26G00450
ATP-dependent DNA helicase 2 subunit KU70.
    
 0.786
ZOSMA_7G01340
Putative DNA-repair protein XRCC4.
    
 0.747
ZOSMA_7G01260
Protein kinase domain-containing protein.
    
  0.713
ZOSMA_34G01290
DNA ligase.
    
 0.660
A0A0K9PYZ5
Uncharacterized protein.
    
 0.660
A0A0K9Q648
Uncharacterized protein.
    
 0.660
ZOSMA_48G00410
Light-inducible protein CPRF2.
   
 0.602
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.