STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_19G00800Auxin F-box protein 5. (603 aa)    
Predicted Functional Partners:
ZOSMA_81G01040
Tify domain-containing protein.
    
 0.905
A0A0K9P9R2
Tify domain-containing protein.
    
 0.905
A0A0K9Q0P6
Tify domain-containing protein.
    
 0.830
A0A0K9NWS8
Putative carboxylesterase 2.
    
 0.813
ZOSMA_75G00800
Tify domain-containing protein.
    
 0.787
ZOSMA_60G00230
Tify domain-containing protein.
    
 0.787
ZOSMA_59G00670
Uncharacterized protein.
    
 0.769
ZOSMA_27G00360
Tify domain-containing protein.
    
 0.742
ZOSMA_79G00320
Putative carboxylesterase 11.
    
 0.590
ZOSMA_36G00730
Putative carboxylesterase 11.
    
 0.590
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.