STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PR12Cytokinin riboside 5'-monophosphate phosphoribohydrolase; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms. (224 aa)    
Predicted Functional Partners:
ZOSMA_84G00350
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.861
A0A0K9Q022
Protein kinase superfamily protein.
    
 0.775
A0A0K9PV71
YTH domain containing 2.
    
  0.741
ZOSMA_27G01460
Uncharacterized protein.
    
 0.646
ZOSMA_8G00130
ARID domain-containing protein.
    
 0.545
A0A0K9P688
High mobility group B protein 9.
    
 0.545
A0A0K9P6M2
HMG box domain-containing protein.
    
 0.545
A0A0K9P734
HMG box domain-containing protein.
    
 0.545
ZOSMA_33G01220
Uncharacterized protein.
    
 0.545
ZOSMA_31G00740
AT-rich interactive domain-containing protein.
    
 0.545
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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