STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PR62Nucleotidyltransferase domain containing protein, expressed. (761 aa)    
Predicted Functional Partners:
ZOSMA_91G00060
RRM domain-containing protein.
    
 
 0.724
ZOSMA_30G00890
Putative Cell differentiation protein rcd1.
    
   0.562
ZOSMA_32G00160
Putative Cell differentiation protein rcd1.
    
   0.562
ZOSMA_24G01530
ATP-dependent RNA helicase DOB1.
   
 
 0.540
A0A0K9PZL4
ATP-dependent RNA helicase DOB1.
   
 
 0.540
ZOSMA_5G03040
Zinc finger CCHC domain-containing protein.
   
 
 0.476
ZOSMA_50G00720
Putative Cellular nucleic acid binding protein.
   
 
 0.476
ZOSMA_10G00860
Uncharacterized protein.
   
 
 0.476
ZOSMA_22G01470
Exosome component 10 protein.
   
 
 0.431
A0A0K9Q494
Uncharacterized protein.
   
 
 0.431
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.