STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_17G00690ATPase; Belongs to the AAA ATPase family. (371 aa)    
Predicted Functional Partners:
A0A0K9PTP7
NPL4-like protein.
    
 0.810
A0A0K9PAQ8
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
    
 0.796
A0A0K9PVV7
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
    
 0.796
ZOSMA_41G00500
Charged multivesicular body protein 3.
   
 0.765
A0A0K9P3J9
Putative UBX domain-containing protein.
   
 0.763
ZOSMA_69G00210
Ubiquitin thioesterase OTU1.
    
 0.750
A0A0K9PKA4
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
 0.743
A0A0K9PVR0
Peroxisomal membrane protein PEX14.
    
 0.743
ZOSMA_76G00540
Peroxisome biogenesis protein 19-2.
    
 0.736
ZOSMA_74G01150
Ataxin 3 variant ref.
   
 0.713
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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