STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PRR4Flavin-containing monooxygenase. (402 aa)    
Predicted Functional Partners:
ZOSMA_8G01340
Amidase 1.
    
 0.880
A0A0K9PX00
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.875
A0A0K9PEN3
Indole-3-acetaldehyde oxidase.
  
 
 0.867
A0A0K9PKZ9
Aminotransferase.
     
 0.859
ZOSMA_54G00870
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.858
A0A0K9PNZ3
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.856
A0A0K9P8F7
Nitrilase 1.
  
 
 0.828
A0A0K9PNB5
Alliinase family protein.
     
 0.828
ZOSMA_1G02950
Alliinase family protein.
     
 0.828
ZOSMA_25G00880
Glutamyl-tRNA(Gln) amidotransferase subunit A.
    
  0.772
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.