STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PRW95'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (974 aa)    
Predicted Functional Partners:
ZOSMA_23G00360
RAI1 protein.
   
 
 0.926
ZOSMA_93G00940
D-aminoacyl-tRNA deacylase.
    
 0.920
ZOSMA_78G00360
D-aminoacyl-tRNA deacylase.
    
 0.920
A0A0K9PNS8
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor.
  
  
 
0.849
ZOSMA_22G01160
Uncharacterized protein.
   
  0.731
ZOSMA_72G00110
Transducin/WD40 repeat-like superfamily protein.
   
  0.712
ZOSMA_20G00760
RRP7 domain-containing protein.
   
  0.692
ZOSMA_5G01950
Uncharacterized protein.
   
 
 0.683
A0A0K9Q4W9
Ribosome biogenesis protein BMS1-like protein.
   
 
 0.683
ZOSMA_86G00100
Putative U3 small nucleolar ribonucleoprotein IMP3.
   
 0.682
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.