STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_18G01370Uncharacterized protein. (60 aa)    
Predicted Functional Partners:
A0A0K9PW34
Uncharacterized protein.
  
 
  0.592
A0A0K9Q299
Uncharacterized protein.
  
 
   0.586
A0A0K9Q3E1
Uncharacterized protein.
  
 
   0.585
ZOSMA_38G00840
Leucine-rich repeat receptor-like protein kinase family.
  
 
  0.578
ZOSMA_62G00050
E3 ubiquitin-protein ligase KEG.
    
 0.519
ZOSMA_71G00110
Uncharacterized protein.
  
     0.516
ZOSMA_35G00570
Uncharacterized protein.
  
     0.513
ZOSMA_1G00290
Putative inactive receptor-like protein kinase.
  
 
  0.512
A0A0K9Q218
Small nuclear ribonucleoprotein-associated protein.
    
 0.509
A0A0K9PZD8
LRRNT_2 domain-containing protein.
  
 
  0.508
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.