STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PS89Uncharacterized protein. (345 aa)    
Predicted Functional Partners:
A0A0K9PR13
E3 ubiquitin-protein ligase RING1.
    
 0.944
ZOSMA_10G00540
E3 ubiquitin-protein ligase RING1.
    
 0.944
A0A0K9PR23
Fertilization-independent endosperm protein.
    
 0.806
ZOSMA_30G00410
Polycomb group protein EMBRYONIC FLOWER 2.
   
 0.754
ZOSMA_78G00180
Putative Dual specificity phosphatase Cdc25.
    
 0.748
ZOSMA_78G00190
Putative Transcription factor Dp-1; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family.
    
 0.744
ZOSMA_56G01430
ChSh domain-containing protein.
    
 0.711
A0A0K9Q0M9
Chromo domain-containing protein.
    
 0.711
ZOSMA_37G00920
Transcription factor (E2F).
    
 0.678
ZOSMA_36G00060
E2F_TDP domain-containing protein.
    
 0.678
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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