STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_16G00580Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. (504 aa)    
Predicted Functional Partners:
A0A0K9PAQ8
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
   
 0.974
A0A0K9PVV7
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
   
 0.974
ZOSMA_26G01130
High affinity Urea Transporter DUR3; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.945
ZOSMA_95G00280
Putative aldehyde dehydrogenase.
  
 0.930
ZOSMA_85G01130
Agmatinase; Belongs to the arginase family.
  
 
 0.926
ZOSMA_31G01440
Ornithine cyclodeaminase.
  
 
 0.925
A0A0K9PXE6
Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.907
ZOSMA_52G01110
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.
     
 0.900
ZOSMA_8G01650
Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.
   
 0.891
ZOSMA_10G01620
Pyrroline-5-carboxylate reductase.
   
 0.891
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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