STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_16G00200GTPase obg. (598 aa)    
Predicted Functional Partners:
ZOSMA_23G00660
Iojap-like protein.
  
 
 0.920
ZOSMA_86G00520
Uncharacterized protein.
  
 
 0.906
ZOSMA_7G01500
50S ribosomal protein L27.
  
 
 0.906
ZOSMA_58G00050
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.876
ZOSMA_34G00430
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.876
A0A0K9PKL1
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.876
ZOSMA_65G00300
Putative 50S ribosomal protein L21.
  
 
 0.873
A0A0K9NYC8
50S ribosomal protein L21.
  
 
 0.870
A0A0K9P9J3
50S ribosomal protein L17, chloroplastic; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.864
A0A0K9PLJ2
50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.864
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.