STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_16G00880S-acyltransferase; Belongs to the DHHC palmitoyltransferase family. (549 aa)    
Predicted Functional Partners:
ZOSMA_31G01060
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
  0.499
ZOSMA_65G00010
S-acyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
0.471
A0A0K9PBT5
Protein BASIC PENTACYSTEINE7.
      
 0.470
ZOSMA_42G00570
DNA repair protein RAD50.
    
 0.456
A0A0K9PEM5
AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which seems to be clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to the vacuole. It also function in maintaining the identity of lytic vacuoles and in regulating the transition between storage and lytic vacuoles.
    
 
 0.454
ZOSMA_88G00230
AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.
      
 0.420
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.