STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_16G01170Elongation factor P. (292 aa)    
Predicted Functional Partners:
ZOSMA_91G00910
50S ribosomal protein L31, chloroplastic.
  
 
 0.964
rps7
Ribosomal protein S7, mitochondrial.
  
 
 0.962
ZOSMA_34G01030
Ribosomal protein 5B; Belongs to the universal ribosomal protein uS7 family.
  
 
 0.962
ZOSMA_80G00170
30S ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.961
A0A0K9PYF8
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.961
ZOSMA_23G00460
Putative 50S ribosomal protein L14; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.958
ZOSMA_1G01990
50S ribosomal protein L14; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.958
ZOSMA_21G01130
Deoxyhypusine synthase.
   
 0.953
A0A0K9PP66
Uncharacterized protein.
   
 
 0.952
A0A0K9PRA6
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 
 0.952
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.