STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PTZ5PsbQ-like 3. (174 aa)    
Predicted Functional Partners:
ZOSMA_30G00320
PsbQ-like 2.
   
 
 0.631
ZOSMA_22G00960
PsbP-like protein 2.
   
 
 0.630
ZOSMA_19G01210
PsbQ-like 1.
   
 
 0.630
ZOSMA_42G00020
PsbP-like protein 1.
   
 
 0.597
ZOSMA_35G00710
Photosystem I reaction center subunit IV.
     
 0.526
ZOSMA_82G00850
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
     
 0.522
A0A0K9P5G5
PsbP domain-containing protein 7, chloroplastic.
     
 0.512
A0A0K9P843
Photosystem II 10 kDa polypeptide, chloroplastic.
     
 0.491
ZOSMA_37G00220
Photosystem II reaction center Psb28 protein; Belongs to the Psb28 family.
     
 0.490
ZOSMA_81G01160
Uncharacterized protein.
     
 0.488
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.