STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PU11Zinc finger CCCH domain-containing protein 59. (582 aa)    
Predicted Functional Partners:
A0A0K9PUF6
Pre-mRNA splicing factor.
   
 
 0.976
ZOSMA_46G00340
Putative Pre-mRNA-splicing factor syf2.
    
  0.790
A0A0K9P9Q1
Pre-mRNA-splicing factor SYF1.
    
 0.750
ZOSMA_30G00030
CWF19-like 2, cell cycle control.
    
0.748
A0A0K9Q0X1
U2 small nuclear ribonucleoprotein A.
    
   0.731
A0A0K9PCJ2
Pre-mRNA-splicing factor CLF1.
   
 
 0.675
ZOSMA_7G00890
Putative Tuftelin interacting protein.
   
 
 0.655
ZOSMA_4G01410
Coiled-coil domain containing 12.
    
  0.648
ZOSMA_96G00440
Lariat debranching enzyme.
   
 
 0.629
ZOSMA_96G00390
Uncharacterized protein.
   
 
 0.629
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.