STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PU13Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (442 aa)    
Predicted Functional Partners:
A0A0K9P2R7
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 0.976
A0A0K9P6F1
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 0.976
ZOSMA_52G01110
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.
   
 
 0.957
A0A0K9PJH8
Citrate synthase; Belongs to the citrate synthase family.
  
 0.957
ZOSMA_11G01030
Citrate synthase.
  
 0.956
ZOSMA_35G00060
Isocitrate dehydrogenase (NAD(+)).
  
 0.951
A0A0K9PC97
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.942
A0A0K9P5Q4
Oxoglutarate dehydrogenase (Succinyl-transferring).
  
 
 0.936
A0A0K9PLJ4
Oxoglutarate dehydrogenase (Succinyl-transferring).
  
 
 0.936
ZOSMA_34G00890
Isocitrate dehydrogenase (NAD(+)).
  
 0.935
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.